I'm learning Cython and came across this snippit of code:
import numpy as np
cimport numpy as np
def mean(np.ndarray[np.double_t] input):
cdef np.double_t cur
# Py_ssize_t is numpy's index type
cdef Py_ssize_t i
cdef Py_ssize_t N = len(input)
for i from 0 <= i < N:
cur += input[i]
return cur / N
a=np.array([1,2,3,4], dtype=np.double)
Obviously, this returns the mean of a which is 2.5. My question is this:
Is the for loop a Python loop, Cython, or C?
Compile it and see: the C code that Cython produces is nicely annotated.
/* "cyexample.pyx":11
* cdef Py_ssize_t N = len(input)
*
* for i from 0 <= i < N: # <<<<<<<<<<<<<<
* cur += input[i]
*
*/
__pyx_t_1 = __pyx_v_N;
for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_1; __pyx_v_i++) {
/* "cyexample.pyx":12
*
* for i from 0 <= i < N:
* cur += input[i] # <<<<<<<<<<<<<<
*
* return cur / N
*/
__pyx_t_2 = __pyx_v_i;
__pyx_t_3 = -1;
if (__pyx_t_2 < 0) {
__pyx_t_2 += __pyx_bshape_0_input;
if (unlikely(__pyx_t_2 < 0)) __pyx_t_3 = 0;
} else if (unlikely(__pyx_t_2 >= __pyx_bshape_0_input)) __pyx_t_3 = 0;
if (unlikely(__pyx_t_3 != -1)) {
__Pyx_RaiseBufferIndexError(__pyx_t_3);
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 12; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
}
__pyx_v_cur = (__pyx_v_cur + (*__Pyx_BufPtrStrided1d(__pyx_t_5numpy_double_t *, __pyx_bstruct_input.buf, __pyx_t_2, __pyx_bstride_0_input)));
}
And so the loop itself is successfully turned into C. Note that these days Cython can handle range naturally, so the older "from 0 <= i < N" style isn't necessary. The point of introducing the (non-Python) "for/from" syntax was to signify which loops should be C-ified.
for..from
seems to be a Pyrex / Cython loop: http://docs.cython.org/src/userguide/language_basics.html#integer-for-loops
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