I have 2 dataFrames and want to compare them and return rows from the first one (df1) that are not in the second one (df2). I found a way to compare them and return the differences, but can't figure out how to return only missing ones from df1.
import pandas as pd
from pandas import Series, DataFrame
df1 = pd.DataFrame( {
"City" : ["Chicago", "San Franciso", "Boston"] ,
"State" : ["Illinois", "California", "Massachusett"] } )
df2 = pd.DataFrame( {
"City" : ["Chicago", "Mmmmiami", "Dallas" , "Omaha"] ,
"State" : ["Illinois", "Florida", "Texas", "Nebraska"] } )
df = pd.concat([df1, df2])
df = df.reset_index(drop=True)
df_gpby = df.groupby(list(df.columns))
idx = [x[0] for x in df_gpby.groups.values() if len(x) == 1]
blah = df.reindex(idx)
Building on @EdChum's suggestion:
df = pd.merge(df1, df2, how='outer', suffixes=('','_y'), indicator=True)
rows_in_df1_not_in_df2 = df[df['_merge']=='left_only'][df1.columns]
rows_in_df1_not_in_df2
|Index |City |State |
|------|------------|------------|
|1 |San Franciso|California |
|2 |Boston |Massachusett|
EDIT: incorporate @RobertPeters suggestion
IIUC then if you're using pandas version 0.17.0
then you can use merge
and set indicator=True
:
In [80]:
df1 = pd.DataFrame( {
"City" : ["Chicago", "San Franciso", "Boston"] ,
"State" : ["Illinois", "California", "Massachusett"] } )
df2 = pd.DataFrame( {
"City" : ["Chicago", "Mmmmiami", "Dallas" , "Omaha"] ,
"State" : ["Illinois", "Florida", "Texas", "Nebraska"] } )
pd.merge(df1,df2, how='outer', indicator=True)
Out[80]:
City State _merge
0 Chicago Illinois both
1 San Franciso California left_only
2 Boston Massachusett left_only
3 Mmmmiami Florida right_only
4 Dallas Texas right_only
5 Omaha Nebraska right_only
This adds a column to indicator whether the rows are only present in either lhs or rhs
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