is there some good and better way to find centroid of contour in opencv, without using built in functions?
While Sonaten's answer is perfectly correct, there is a simple way to do it: Use the dedicated opencv function for that: moments()
http://opencv.itseez.com/modules/imgproc/doc/structural_analysis_and_shape_descriptors.html?highlight=moments#moments
It does not only returns the centroid, but some more statistics about your shape. And you can send it a contour or a raster shape (binary image), whatever best fits your need.
EDIT
example (modified) from "Learning OpenCV", by gary bradsky
CvMoments moments;
double M00, M01, M10;
cvMoments(contour,&moments);
M00 = cvGetSpatialMoment(&moments,0,0);
M10 = cvGetSpatialMoment(&moments,1,0);
M01 = cvGetSpatialMoment(&moments,0,1);
centers[i].x = (int)(M10/M00);
centers[i].y = (int)(M01/M00);
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