I was just trying to catch an OptimizeWarning
thrown by the scipy.optimize.curve_fit
function, but I realized it was not recognized as a valid exception.
This is a non-working simple idea of what I'm doing:
from scipy.optimize import curve_fit
try:
popt, pcov = curve_fit(some parameters)
except OptimizeWarning:
print 'Maxed out calls.'
# do something
I looked around the docs but there was nothing there.
Am I missing something obvious or is it simply not defined for some reason?
BTW, this is the full warning I get and that I want to catch:
/usr/local/lib/python2.7/dist-packages/scipy/optimize/minpack.py:604: OptimizeWarning: Covariance of the parameters could not be estimated
category=OptimizeWarning)
You can require that Python raise this warning as an exception using the following code:
import warnings
from scipy.optimize import OptimizeWarning
warnings.simplefilter("error", OptimizeWarning)
# Your code here
Unfortunately, warnings
in Python have a few issues you need to be aware of.
First, there can be multiple filters, so your warning filter can be overridden by something else. This is not too bad and can be worked around with the catch_warnings
context manager:
import warnings
from scipy.optimize import OptimizeWarning
with warnings.catch_warnings():
warnings.simplefilter("error", OptimizeWarning)
try:
# Do your thing
except OptimizeWarning:
# Do your other thing
Second, warnings are only raised once by default. If your warning has already been raised before you set the filter, you can change the filter, it won't raise the warning again.
To my knowledge, there unfortunately is not much you can do about this. You'll want to make sure you run the warnings.simplefilter("error", OptimizeWarning)
as early as possible.
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