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Cannot get histogram to show separated bins with vertical lines

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Annoying strange problem and I have not been able to find a solution on this site yet (although the question has popped up)

I am trying to make a histogram where the bins have the 'bar style' where vertical lines separate each bin but no matter what I change the histtype constructor to I get a step filled histogram.

Here is my code. Note I am using jupyter notebook installed via anaconda with python version 2.7.6

import numpy as np import matplotlib.pyplot as plt  x = np.random.rand((100))  bins = np.linspace(0, 2, 40) plt.title('Relative Amplitude',fontsize=30) plt.xlabel('Random Histogram') plt.ylabel('Frequency',fontsize=30) plt.hist(x, bins, alpha=0.5, histtype='bar')  plt.legend(loc='upper right',fontsize=30) plt.xticks(fontsize = 20)  plt.yticks(fontsize = 20)  plt.show()  

Thats it and I get a step filled diagram with no vertical lines separating the bars. What is annoying is that I didn't have this problem awhile ago, something clearly has changed and I don't know what.I have tried histype='barstacked' as well. Thank you kindly for your help

enter image description here

like image 581
Canuck Avatar asked Mar 01 '17 21:03

Canuck


1 Answers

Using your example:

import numpy as np import matplotlib.pyplot as plt  x = np.random.rand((100))  bins = np.linspace(0, 2, 40) plt.title('Relative Amplitude',fontsize=30) plt.xlabel('Random Histogram') plt.ylabel('Frequency',fontsize=30) plt.hist(x, bins, alpha=0.5, histtype='bar', ec='black')  plt.legend(loc='upper right',fontsize=30) plt.xticks(fontsize = 20)  plt.yticks(fontsize = 20)  plt.show()  

Which produces the following image:

enter image description here

The key difference is the use of the ec keyword argument. This is short for "edgecolor". In the documentation for plt.hist it says that in addition to all of the listed keyword arguments, plt.hist also takes keyword arguments for the Patch initializer. edgecolor is one of those keyword arguments. That's why it's not explicitly listed in the documentation for plt.hist. All of the bars in the plot are an individual Patch object, so you're saying you want all of the bars to be drawn with a black outline (or edgecolor in matplotlib jargon).

like image 134
ngoldbaum Avatar answered Oct 02 '22 06:10

ngoldbaum