Android Studio fails to build

Question

I have very strange problem, I have a project that has other dependencies. The project builds fine with gradle in command line, however when it comes to Android Studio I cannot make it work at all. I spend around 6 hours trying and I give up. The error I get from Android studio is

Gradle 'sample-app-project' project refresh failed:
     Could not fetch model of type 'IdeaProject' using Gradle distribution 'http://services.gradle.org/distributions/gradle-1.6-bin.zip'.
     A problem occurred configuring project ':sample-app'.
     A problem occurred configuring project ':sample-app'.
     Failed to notify project evaluation listener.
     Configuration with name 'default' not found.

It looks that it has problem with downloading the zip, but why would it work in terminal. To be honest I have been using Android Studio since it launched, but I never really understood how to use the Modules properly.

Why 'sample-app-project' is a top root module and it has 'Android-Gradle' and there is another module 'sample-app' which has both 'Android-Gradle' and 'Android'.

This is the log from Android Studio.

2013-06-10 22:45:02,910 [   5313]   INFO - rains.ide.BuiltInServerManager - built-in server started, port 63342
2013-06-10 22:45:04,847 [   7250]   INFO - nject.config.XPathSupportProxy - XPath Support is not available
2013-06-10 22:45:04,869 [   7272]   INFO - s.impl.stores.FileBasedStorage - Document was not loaded for $PROJECT_CONFIG_DIR$/IntelliLang.xml file is null
2013-06-10 22:45:05,230 [   7633]   INFO - indexing.UnindexedFilesUpdater - Indexable files iterated in 2435 ms
2013-06-10 22:45:05,230 [   7633]   INFO - indexing.UnindexedFilesUpdater - Unindexed files update started: 1 files to update
2013-06-10 22:45:05,306 [   7709]   INFO - indexing.UnindexedFilesUpdater - Unindexed files update done in 76 ms
2013-06-10 22:45:05,380 [   7783]   INFO - t.AndroidGradleProjectResolver - Added to RMI/Gradle process classpath: [/usr/local/etc/android-studio/plugins/android/lib/android.jar, /usr/local/etc/android-studio/plugins/android/lib/builder-0.4-SNAPSHOT.jar, /usr/local/etc/android-studio/plugins/android/lib/gradle-model-0.4-SNAPSHOT.jar, /usr/local/etc/android-studio/plugins/android/lib/gradle-0.4-SNAPSHOT.jar, /usr/local/etc/android-studio/plugins/android/lib/builder-model-0.4-SNAPSHOT.jar]
2013-06-10 22:45:05,535 [   7938]   INFO - ution.rmi.RemoteProcessSupport - /usr/lib/jvm/java-6-openjdk-amd64/jre/bin/java -Djava.awt.headless=true -Xmx512m -Dsun.rmi.transport.connectionTimeout=3600000 -Dfile.encoding=UTF-8 -classpath /usr/local/etc/android-studio/lib/idea.jar:/usr/local/etc/android-studio/lib/resources_en.jar:/usr/local/etc/android-studio/lib/jna-utils.jar:/usr/local/etc/android-studio/lib/util.jar:/usr/local/etc/android-studio/lib/oromatcher.jar:/usr/local/etc/android-studio/lib/trove4j.jar:/usr/local/etc/android-studio/lib/log4j.jar:/usr/local/etc/android-studio/lib/picocontainer.jar:/usr/local/etc/android-studio/lib/jna.jar:/usr/local/etc/android-studio/lib/jdom.jar:/usr/local/etc/android-studio/lib/annotations.jar:/usr/local/etc/android-studio/lib/openapi.jar:/usr/local/etc/android-studio/lib/extensions.jar:/usr/lib/jvm/java-6-openjdk-amd64/jre/lib/rt.jar:/usr/local/etc/android-studio/plugins/gradle/lib/resources_en.jar:/usr/local/etc/android-studio/plugins/gradle/lib/gradle-base-services-1.6.jar:/usr/local/etc/android-studio/plugins/gradle/lib/slf4j-simple-1.7.2.jar:/usr/local/etc/android-studio/plugins/gradle/lib/jsr305-1.3.9.jar:/usr/local/etc/android-studio/plugins/gradle/lib/gradle-messaging-1.6.jar:/usr/local/etc/android-studio/plugins/gradle/lib/slf4j-api-1.7.2.jar:/usr/local/etc/android-studio/plugins/gradle/lib/gradle-core-1.6.jar:/usr/local/etc/android-studio/plugins/gradle/lib/gradle.jar:/usr/local/etc/android-studio/plugins/gradle/lib/gradle-wrapper-1.6.jar:/usr/local/etc/android-studio/plugins/gradle/lib/gradle-tooling-api-1.6.jar:/usr/local/etc/android-studio/plugins/gradle/lib/guava-11.0.2.jar:/usr/local/etc/android-studio/plugins/android/lib/android.jar:/usr/local/etc/android-studio/plugins/android/lib/builder-0.4-SNAPSHOT.jar:/usr/local/etc/android-studio/plugins/android/lib/gradle-model-0.4-SNAPSHOT.jar:/usr/local/etc/android-studio/plugins/android/lib/gradle-0.4-SNAPSHOT.jar:/usr/local/etc/android-studio/plugins/android/lib/builder-model-0.4-SNAPSHOT.jar com.intellij.openapi.externalSystem.service.ExternalSystemFacadeImpl org.jetbrains.plugins.gradle.service.project.GradleProjectResolver org.jetbrains.plugins.gradle.remote.impl.GradleTaskManager
2013-06-10 22:45:05,765 [   8168]   INFO - ution.rmi.RemoteProcessSupport - Port/ID: 50332/ExternalSystemFacadeImplb8fc4a33
2013-06-10 22:45:06,110 [   8513]   INFO - s.plugins.gradle.GradleManager - Instructing gradle to use java from /usr/lib/jvm/java-6-openjdk-amd64
2013-06-10 22:45:06,171 [   8574]   INFO - s.plugins.gradle.GradleManager - Instructing gradle to use java from /usr/lib/jvm/java-6-openjdk-amd64
2013-06-10 22:45:06,598 [   9001]   INFO - ution.rmi.RemoteProcessSupport - 22:45:06.589 [Connection worker] DEBUG o.g.t.i.provider.DefaultConnection - Tooling API provider 1.6 created.
        2013-06-10 22:45:06,675 [   9078]   INFO - tor.impl.FileEditorManagerImpl - Project opening took 5900 ms
2013-06-10 22:45:06,787 [   9190]   INFO - ution.rmi.RemoteProcessSupport - 22:45:06.782 [Connection worker] DEBUG o.g.t.i.provider.ProviderConnection - Configuring logging to level: INFO
2013-06-10 22:45:06,809 [   9212]   INFO - ution.rmi.RemoteProcessSupport - Tooling API uses target gradle version: 1.6.
2013-06-10 22:45:06,907 [   9310]   INFO - s.impl.stores.FileBasedStorage - Document was not loaded for $PROJECT_CONFIG_DIR$/codeStyleSettings.xml file is null
2013-06-10 22:45:06,909 [   9312]   INFO - s.impl.stores.FileBasedStorage - Document was not loaded for $PROJECT_CONFIG_DIR$/projectCodeStyle.xml file is null
2013-06-10 22:45:07,134 [   9537]   INFO - s.impl.stores.FileBasedStorage - Document was not loaded for $PROJECT_CONFIG_DIR$/fileColors.xml file is null
2013-06-10 22:45:07,184 [   9587]   INFO - attrs.AttributeDefinitionsImpl - Found tag with unknown parent: AndroidManifest.AndroidManifestCompatibleScreens
2013-06-10 22:45:07,254 [   9657]   INFO - ution.rmi.RemoteProcessSupport - Starting Gradle daemon
2013-06-10 22:45:07,286 [   9689]   INFO - ution.rmi.RemoteProcessSupport - Starting daemon process: workingDir = /home/mike/.gradle/daemon/1.6, daemonArgs: [/usr/lib/jvm/java-6-openjdk-amd64/bin/java, -Xmx512m, -Dfile.encoding=UTF-8, -cp, /home/mike/.gradle/wrapper/dists/gradle-1.6-bin/72srdo3a5eb3bic159kar72vok/gradle-1.6/lib/gradle-launcher-1.6.jar, org.gradle.launcher.daemon.bootstrap.GradleDaemon, 1.6, /home/mike/.gradle/daemon, 60000, 265f142f-72b1-4380-86ca-b8922dddacec, -Xmx512m, -Dfile.encoding=UTF-8]
2013-06-10 22:45:07,313 [   9716]   INFO - ution.rmi.RemoteProcessSupport - Starting process 'Gradle build daemon'. Working directory: /home/mike/.gradle/daemon/1.6 Command: /usr/lib/jvm/java-6-openjdk-amd64/bin/java -Xmx512m -Dfile.encoding=UTF-8 -cp /home/mike/.gradle/wrapper/dists/gradle-1.6-bin/72srdo3a5eb3bic159kar72vok/gradle-1.6/lib/gradle-launcher-1.6.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 1.6 /home/mike/.gradle/daemon 60000 265f142f-72b1-4380-86ca-b8922dddacec -Xmx512m -Dfile.encoding=UTF-8
2013-06-10 22:45:07,319 [   9722]   INFO - ution.rmi.RemoteProcessSupport - An attempt to initialize for well behaving parent process finished.
2013-06-10 22:45:07,330 [   9733]   INFO - ution.rmi.RemoteProcessSupport - Successfully started process 'Gradle build daemon'
2013-06-10 22:45:07,865 [  10268]   INFO - ution.rmi.RemoteProcessSupport - Process 'Gradle build daemon' finished with exit value 0 (state: DETACHED)
2013-06-10 22:45:07,872 [  10275]   INFO - ution.rmi.RemoteProcessSupport - An attempt to start the daemon took 0.581 secs.
        2013-06-10 22:45:07,909 [  10312]   INFO - ution.rmi.RemoteProcessSupport - Connected to the daemon. Dispatching Build{id=22396036-8d04-4f3b-bba7-ab61d4b625a1.1, currentDir=/usr/local/etc/android-studio/bin} request.
        2013-06-10 22:45:11,295 [  13698]   INFO - ution.rmi.RemoteProcessSupport - The TaskContainer.add() method has been deprecated and is scheduled to be removed in Gradle 2.0. Please use the create() method instead.
        2013-06-10 22:45:11,458 [  13861]   WARN - ution.rmi.RemoteProcessSupport -
        2013-06-10 22:45:11,458 [  13861]   WARN - ution.rmi.RemoteProcessSupport - FAILURE: Build failed with an exception.
2013-06-10 22:45:11,465 [  13868]   WARN - ution.rmi.RemoteProcessSupport -
        2013-06-10 22:45:11,465 [  13868]   WARN - ution.rmi.RemoteProcessSupport - * What went wrong:
2013-06-10 22:45:11,465 [  13868]   WARN - ution.rmi.RemoteProcessSupport - A problem occurred configuring project ':sample-app'.
2013-06-10 22:45:11,465 [  13868]   WARN - ution.rmi.RemoteProcessSupport - >
        2013-06-10 22:45:11,466 [  13869]   WARN - ution.rmi.RemoteProcessSupport - Failed to notify project evaluation listener.
2013-06-10 22:45:11,472 [  13875]   WARN - ution.rmi.RemoteProcessSupport - > Configuration with name 'default' not found.
2013-06-10 22:45:11,473 [  13876]   WARN - ution.rmi.RemoteProcessSupport -
        2013-06-10 22:45:11,474 [  13877]   WARN - ution.rmi.RemoteProcessSupport - * Try:
2013-06-10 22:45:11,480 [  13883]   WARN - ution.rmi.RemoteProcessSupport - Run with --stacktrace option to get the stack trace. Run with --info or --debug option to get more log output.
        2013-06-10 22:45:11,481 [  13884]   INFO - ution.rmi.RemoteProcessSupport -
        2013-06-10 22:45:11,487 [  13890]   INFO - ution.rmi.RemoteProcessSupport - BUILD FAILED
2013-06-10 22:45:11,487 [  13890]   INFO - ution.rmi.RemoteProcessSupport -
        2013-06-10 22:45:11,487 [  13890]   INFO - ution.rmi.RemoteProcessSupport - Total time: 5.162 secs
2013-06-10 22:45:11,615 [  14018]   WARN - nal.AbstractExternalSystemTask -
        java.lang.reflect.UndeclaredThrowableException
at sun.proxy.$Proxy3.resolveProjectInfo(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:616)
at sun.rmi.server.UnicastServerRef.dispatch(UnicastServerRef.java:322)
at sun.rmi.transport.Transport$1.run(Transport.java:177)
at java.security.AccessController.doPrivileged(Native Method)
at sun.rmi.transport.Transport.serviceCall(Transport.java:173)
at sun.rmi.transport.tcp.TCPTransport.handleMessages(TCPTransport.java:553)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run0(TCPTransport.java:808)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run(TCPTransport.java:667)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1146)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:679)
at sun.rmi.transport.StreamRemoteCall.exceptionReceivedFromServer(StreamRemoteCall.java:273)
at sun.rmi.transport.StreamRemoteCall.executeCall(StreamRemoteCall.java:251)
at sun.rmi.server.UnicastRef.invoke(UnicastRef.java:160)
at java.rmi.server.RemoteObjectInvocationHandler.invokeRemoteMethod(RemoteObjectInvocationHandler.java:194)
at java.rmi.server.RemoteObjectInvocationHandler.invoke(RemoteObjectInvocationHandler.java:148)
at sun.proxy.$Proxy88.resolveProjectInfo(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:616)
at com.intellij.execution.rmi.RemoteUtil$2$1$1.compute(RemoteUtil.java:104)
at com.intellij.execution.rmi.RemoteUtil.executeWithClassLoader(RemoteUtil.java:165)
at com.intellij.execution.rmi.RemoteUtil$2$1.invoke(RemoteUtil.java:101)
at sun.proxy.$Proxy88.resolveProjectInfo(Unknown Source)
at com.intellij.openapi.externalSystem.service.remote.wrapper.ExternalSystemProjectResolverWrapper.resolveProjectInfo(ExternalSystemProjectResolverWrapper.java:49)
at com.intellij.openapi.externalSystem.service.internal.ExternalSystemResolveProjectTask.doExecute(ExternalSystemResolveProjectTask.java:53)
at com.intellij.openapi.externalSystem.service.internal.AbstractExternalSystemTask.execute(AbstractExternalSystemTask.java:130)
at com.intellij.openapi.externalSystem.service.internal.AbstractExternalSystemTask.execute(AbstractExternalSystemTask.java:120)
at com.intellij.openapi.externalSystem.util.ExternalSystemUtil$3.execute(ExternalSystemUtil.java:328)
at com.intellij.openapi.externalSystem.util.ExternalSystemUtil$4$2.run(ExternalSystemUtil.java:369)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$TaskRunnable.run(ProgressManagerImpl.java:502)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$2.run(ProgressManagerImpl.java:185)
at com.intellij.openapi.progress.impl.ProgressManagerImpl.executeProcessUnderProgress(ProgressManagerImpl.java:229)
at com.intellij.openapi.progress.impl.ProgressManagerImpl.runProcess(ProgressManagerImpl.java:175)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$8.run(ProgressManagerImpl.java:404)
at com.intellij.openapi.application.impl.ApplicationImpl$8.run(ApplicationImpl.java:460)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
at java.util.concurrent.FutureTask.run(FutureTask.java:166)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1146)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:679)
at com.intellij.openapi.application.impl.ApplicationImpl$1$1.run(ApplicationImpl.java:155)
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:616)
at com.intellij.openapi.externalSystem.service.ExternalSystemFacadeImpl$2.invoke(ExternalSystemFacadeImpl.java:154)
at sun.proxy.$Proxy3.resolveProjectInfo(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:616)
at sun.rmi.server.UnicastServerRef.dispatch(UnicastServerRef.java:322)
at sun.rmi.transport.Transport$1.run(Transport.java:177)
at java.security.AccessController.doPrivileged(Native Method)
at sun.rmi.transport.Transport.serviceCall(Transport.java:173)
at sun.rmi.transport.tcp.TCPTransport.handleMessages(TCPTransport.java:553)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run0(TCPTransport.java:808)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run(TCPTransport.java:667)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1146)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:679)
Caused by: com.intellij.openapi.externalSystem.model.ExternalSystemException: Could not fetch model of type 'IdeaProject' using Gradle distribution 'http://services.gradle.org/distributions/gradle-1.6-bin.zip'.
A problem occurred configuring project ':sample-app'.
        A problem occurred configuring project ':sample-app'.
Failed to notify project evaluation listener.
        Configuration with name 'default' not found.
at org.jetbrains.plugins.gradle.service.project.GradleExecutionHelper.execute(GradleExecutionHelper.java:111)
at com.android.tools.idea.gradle.project.AndroidGradleProjectResolver.resolveProjectInfo(AndroidGradleProjectResolver.java:96)
at com.android.tools.idea.gradle.project.AndroidGradleProjectResolver.resolveProjectInfo(AndroidGradleProjectResolver.java:54)
at org.jetbrains.plugins.gradle.service.project.GradleProjectResolver.resolveProjectInfo(GradleProjectResolver.java:75)
at org.jetbrains.plugins.gradle.service.project.GradleProjectResolver.resolveProjectInfo(GradleProjectResolver.java:42)
at com.intellij.openapi.externalSystem.service.remote.RemoteExternalSystemProjectResolverImpl$1.produce(RemoteExternalSystemProjectResolverImpl.java:41)
at com.intellij.openapi.externalSystem.service.remote.RemoteExternalSystemProjectResolverImpl$1.produce(RemoteExternalSystemProjectResolverImpl.java:37)
at com.intellij.openapi.externalSystem.service.remote.AbstractRemoteExternalSystemService.execute(AbstractRemoteExternalSystemService.java:59)
at com.intellij.openapi.externalSystem.service.remote.RemoteExternalSystemProjectResolverImpl.resolveProjectInfo(RemoteExternalSystemProjectResolverImpl.java:37)
... 20 more
2013-06-10 22:45:11,620 [  14023]  ERROR - plication.impl.ApplicationImpl - Access is allowed from event dispatch thread only.
Details: Current thread: Thread[ApplicationImpl pooled thread 3,4,Idea Thread Group] 371159127
Our dispatch thread:Thread[AWT-EventQueue-1 0.1.3#AI-130.700763, eap:true,6,Idea Thread Group] 562082350
SystemEventQueueThread: Thread[AWT-EventQueue-1 0.1.3#AI-130.700763, eap:true,6,Idea Thread Group] 562082350
java.lang.Throwable
at com.intellij.openapi.diagnostic.Logger.error(Logger.java:62)
at com.intellij.openapi.application.impl.ApplicationImpl.assertIsDispatchThread(ApplicationImpl.java:1130)
at com.intellij.openapi.application.impl.ApplicationImpl.assertIsDispatchThread(ApplicationImpl.java:1118)
at com.intellij.openapi.wm.impl.ToolWindowImpl.setTitle(ToolWindowImpl.java:358)
at com.intellij.openapi.externalSystem.service.task.ui.AbstractExternalSystemToolWindowFactory.createToolWindowContent(AbstractExternalSystemToolWindowFactory.java:49)
at com.intellij.openapi.wm.impl.ToolWindowImpl.ensureContentInitialized(ToolWindowImpl.java:448)
at com.intellij.openapi.externalSystem.util.ExternalSystemUtil.getToolWindowElement(ExternalSystemUtil.java:121)
at com.intellij.openapi.externalSystem.service.notification.ExternalSystemIdeNotificationManager.processExternalProjectRefreshError(ExternalSystemIdeNotificationManager.java:43)
at com.intellij.openapi.externalSystem.util.ExternalSystemUtil$3.execute(ExternalSystemUtil.java:347)
at com.intellij.openapi.externalSystem.util.ExternalSystemUtil$4$2.run(ExternalSystemUtil.java:369)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$TaskRunnable.run(ProgressManagerImpl.java:502)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$2.run(ProgressManagerImpl.java:185)
at com.intellij.openapi.progress.impl.ProgressManagerImpl.executeProcessUnderProgress(ProgressManagerImpl.java:229)
at com.intellij.openapi.progress.impl.ProgressManagerImpl.runProcess(ProgressManagerImpl.java:175)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$8.run(ProgressManagerImpl.java:404)
at com.intellij.openapi.application.impl.ApplicationImpl$8.run(ApplicationImpl.java:460)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
at java.util.concurrent.FutureTask.run(FutureTask.java:166)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1146)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:679)
at com.intellij.openapi.application.impl.ApplicationImpl$1$1.run(ApplicationImpl.java:155)
2013-06-10 22:45:11,624 [  14027]  ERROR - plication.impl.ApplicationImpl - Android Studio (I/O Preview) AI-130.700763  Build #AI-130.700763
2013-06-10 22:45:11,624 [  14027]  ERROR - plication.impl.ApplicationImpl - JDK: 1.6.0_27
2013-06-10 22:45:11,624 [  14027]  ERROR - plication.impl.ApplicationImpl - VM: OpenJDK 64-Bit Server VM
2013-06-10 22:45:11,624 [  14027]  ERROR - plication.impl.ApplicationImpl - Vendor: Sun Microsystems Inc.
2013-06-10 22:45:11,624 [  14027]  ERROR - plication.impl.ApplicationImpl - OS: Linux
2013-06-10 22:45:11,624 [  14027]  ERROR - plication.impl.ApplicationImpl - Last Action:
2013-06-10 22:45:11,625 [  14028]  ERROR - plication.impl.ApplicationImpl - Access is allowed from event dispatch thread only.
Details: Current thread: Thread[ApplicationImpl pooled thread 3,4,Idea Thread Group] 371159127
Our dispatch thread:Thread[AWT-EventQueue-1 0.1.3#AI-130.700763, eap:true,6,Idea Thread Group] 562082350
SystemEventQueueThread: Thread[AWT-EventQueue-1 0.1.3#AI-130.700763, eap:true,6,Idea Thread Group] 562082350
java.lang.Throwable
at com.intellij.openapi.diagnostic.Logger.error(Logger.java:62)
at com.intellij.openapi.application.impl.ApplicationImpl.assertIsDispatchThread(ApplicationImpl.java:1130)
at com.intellij.openapi.application.impl.ApplicationImpl.assertIsDispatchThread(ApplicationImpl.java:1118)
at com.intellij.openapi.wm.impl.ToolWindowImpl.getTitle(ToolWindowImpl.java:342)
at com.intellij.openapi.wm.impl.ToolWindowImpl.setTitle(ToolWindowImpl.java:359)
at com.intellij.openapi.externalSystem.service.task.ui.AbstractExternalSystemToolWindowFactory.createToolWindowContent(AbstractExternalSystemToolWindowFactory.java:49)
at com.intellij.openapi.wm.impl.ToolWindowImpl.ensureContentInitialized(ToolWindowImpl.java:448)
at com.intellij.openapi.externalSystem.util.ExternalSystemUtil.getToolWindowElement(ExternalSystemUtil.java:121)
at com.intellij.openapi.externalSystem.service.notification.ExternalSystemIdeNotificationManager.processExternalProjectRefreshError(ExternalSystemIdeNotificationManager.java:43)
at com.intellij.openapi.externalSystem.util.ExternalSystemUtil$3.execute(ExternalSystemUtil.java:347)
at com.intellij.openapi.externalSystem.util.ExternalSystemUtil$4$2.run(ExternalSystemUtil.java:369)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$TaskRunnable.run(ProgressManagerImpl.java:502)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$2.run(ProgressManagerImpl.java:185)
at com.intellij.openapi.progress.impl.ProgressManagerImpl.executeProcessUnderProgress(ProgressManagerImpl.java:229)
at com.intellij.openapi.progress.impl.ProgressManagerImpl.runProcess(ProgressManagerImpl.java:175)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$8.run(ProgressManagerImpl.java:404)
at com.intellij.openapi.application.impl.ApplicationImpl$8.run(ApplicationImpl.java:460)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
at java.util.concurrent.FutureTask.run(FutureTask.java:166)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1146)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:679)
at com.intellij.openapi.application.impl.ApplicationImpl$1$1.run(ApplicationImpl.java:155)
2013-06-10 22:45:11,625 [  14028]  ERROR - plication.impl.ApplicationImpl - Android Studio (I/O Preview) AI-130.700763  Build #AI-130.700763
2013-06-10 22:45:11,625 [  14028]  ERROR - plication.impl.ApplicationImpl - JDK: 1.6.0_27
2013-06-10 22:45:11,625 [  14028]  ERROR - plication.impl.ApplicationImpl - VM: OpenJDK 64-Bit Server VM
2013-06-10 22:45:11,625 [  14028]  ERROR - plication.impl.ApplicationImpl - Vendor: Sun Microsystems Inc.
2013-06-10 22:45:11,625 [  14028]  ERROR - plication.impl.ApplicationImpl - OS: Linux
2013-06-10 22:45:11,625 [  14028]  ERROR - plication.impl.ApplicationImpl - Last Action:
2013-06-10 22:45:11,626 [  14029]  ERROR - plication.impl.ApplicationImpl - Access is allowed from event dispatch thread only.
Details: Current thread: Thread[ApplicationImpl pooled thread 3,4,Idea Thread Group] 371159127
Our dispatch thread:Thread[AWT-EventQueue-1 0.1.3#AI-130.700763, eap:true,6,Idea Thread Group] 562082350
SystemEventQueueThread: Thread[AWT-EventQueue-1 0.1.3#AI-130.700763, eap:true,6,Idea Thread Group] 562082350
java.lang.Throwable
at com.intellij.openapi.diagnostic.Logger.error(Logger.java:62)
at com.intellij.openapi.application.impl.ApplicationImpl.assertIsDispatchThread(ApplicationImpl.java:1130)
at com.intellij.openapi.application.impl.ApplicationImpl.assertIsDispatchThread(ApplicationImpl.java:1118)
at com.intellij.openapi.wm.impl.ToolWindowImpl.getTitle(ToolWindowImpl.java:342)
at com.intellij.openapi.wm.impl.InternalDecorator.updateTitle(InternalDecorator.java:571)
at com.intellij.openapi.wm.impl.InternalDecorator.access$1500(InternalDecorator.java:59)
at com.intellij.openapi.wm.impl.InternalDecorator$ToolWindowHandler.propertyChange(InternalDecorator.java:870)
at java.beans.PropertyChangeSupport.fire(PropertyChangeSupport.java:298)
at java.beans.PropertyChangeSupport.firePropertyChange(PropertyChangeSupport.java:291)
at java.beans.PropertyChangeSupport.firePropertyChange(PropertyChangeSupport.java:229)
at com.intellij.openapi.wm.impl.ToolWindowImpl.setTitle(ToolWindowImpl.java:361)
at com.intellij.openapi.externalSystem.service.task.ui.AbstractExternalSystemToolWindowFactory.createToolWindowContent(AbstractExternalSystemToolWindowFactory.java:49)
at com.intellij.openapi.wm.impl.ToolWindowImpl.ensureContentInitialized(ToolWindowImpl.java:448)
at com.intellij.openapi.externalSystem.util.ExternalSystemUtil.getToolWindowElement(ExternalSystemUtil.java:121)
at com.intellij.openapi.externalSystem.service.notification.ExternalSystemIdeNotificationManager.processExternalProjectRefreshError(ExternalSystemIdeNotificationManager.java:43)
at com.intellij.openapi.externalSystem.util.ExternalSystemUtil$3.execute(ExternalSystemUtil.java:347)
at com.intellij.openapi.externalSystem.util.ExternalSystemUtil$4$2.run(ExternalSystemUtil.java:369)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$TaskRunnable.run(ProgressManagerImpl.java:502)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$2.run(ProgressManagerImpl.java:185)
at com.intellij.openapi.progress.impl.ProgressManagerImpl.executeProcessUnderProgress(ProgressManagerImpl.java:229)
at com.intellij.openapi.progress.impl.ProgressManagerImpl.runProcess(ProgressManagerImpl.java:175)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$8.run(ProgressManagerImpl.java:404)
at com.intellij.openapi.application.impl.ApplicationImpl$8.run(ApplicationImpl.java:460)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
at java.util.concurrent.FutureTask.run(FutureTask.java:166)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1146)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:679)
at com.intellij.openapi.application.impl.ApplicationImpl$1$1.run(ApplicationImpl.java:155)
2013-06-10 22:45:11,626 [  14029]  ERROR - plication.impl.ApplicationImpl - Android Studio (I/O Preview) AI-130.700763  Build #AI-130.700763
2013-06-10 22:45:11,626 [  14029]  ERROR - plication.impl.ApplicationImpl - JDK: 1.6.0_27
2013-06-10 22:45:11,626 [  14029]  ERROR - plication.impl.ApplicationImpl - VM: OpenJDK 64-Bit Server VM
2013-06-10 22:45:11,627 [  14030]  ERROR - plication.impl.ApplicationImpl - Vendor: Sun Microsystems Inc.
2013-06-10 22:45:11,627 [  14030]  ERROR - plication.impl.ApplicationImpl - OS: Linux
2013-06-10 22:45:11,627 [  14030]  ERROR - plication.impl.ApplicationImpl - Last Action:
2013-06-10 22:46:11,920 [  74323]   INFO - ution.rmi.RemoteProcessSupport - Process finished with exit code 0
2013-06-10 22:47:54,625 [ 177028]   INFO - ellij.project.impl.ProjectImpl - 25 project components initialized in 14 ms
2013-06-10 22:47:54,625 [ 177028]   INFO - le.impl.ModuleManagerComponent - 0 module(s) loaded in 0 ms
2013-06-10 22:47:54,675 [ 177078]   INFO - s.impl.stores.FileBasedStorage - Document was not loaded for $APP_CONFIG$/applicationLibraries.xml file is null

I do not think that there is a problem with gradle build/settings files because I can install the app onto the device from command line. I am running the newest version of Android Studio 1.6.0_27 and I have both gradle wrapper and gradle 1.6 installed locally. I have linux debian wheezy.

Thank you for help

Answer 1

Check this instructions http://developer.android.com/sdk/installing/migrate.html

Is oficial instrucction for Android.