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two column bipartite layout with igraph

Tags:

r

igraph

I'm trying to plot a bipartite graph, but with two columns; the function manual states that layout_as_bipartite() "Minimize[s] edge-crossings in a simple two-row (or column) layout for bipartite graphs." Trying with the example, I can only get two row graphs:

library(igraph)
library(dplyr)
# Random bipartite graph
inc <- matrix(sample(0:1, 50, replace = TRUE, prob=c(2,1)), 10, 5)
g <- graph_from_incidence_matrix(inc)
plot(g, layout = layout_as_bipartite,
     vertex.color=c("green","cyan")[V(g)$type+1])

# Two columns
g %>%
  add_layout_(as_bipartite()) %>%
  plot()
like image 533
Elio Diaz Avatar asked May 07 '26 03:05

Elio Diaz


1 Answers

It appears that layout_as_bipartite only does rows, not columns, but it is easy to just modify the resulting layout. The layout is simply X-Y coordinates for the nodes, so to change from rows to columns, just switch X and Y.

LO = layout_as_bipartite(g)
LO = LO[,c(2,1)]
plot(g, layout = LO, vertex.color=c("green","cyan")[V(g)$type+1])

Bipartite with Columns

like image 179
G5W Avatar answered May 09 '26 17:05

G5W