It seems that when training models in caret you are almost forced into parameter tuning. I know that this is generally a good idea but what if I wanted to explicitly state a models parameters when training?
svm.nf <- train(y ~ .,
data = nf,
method = "svmRadial",
C = 4, sigma = 0.25, tuneLength = 0)
Something is wrong; all the RMSE metric values are missing:
RMSE Rsquared
Min. : NA Min. : NA
1st Qu.: NA 1st Qu.: NA
Median : NA Median : NA
Mean :NaN Mean :NaN
3rd Qu.: NA 3rd Qu.: NA
Max. : NA Max. : NA
NA's :2 NA's :2
Error in train.default(x, y, weights = w, ...) : Stopping In addition: Warning message: In nominalTrainWorkflow(x = x, y = y, wts = weights, info = trainInfo, : There were missing values in resampled performance measures.
I figured out one way, it is somewhat obscure. You must create a data frame of tuning parameters that is passed to tuneGrid, except only list 1 value for each parameter.
params <- data.frame(C = 4,sigma=.25)
> params
C sigma
1 4 0.25
svm.nf <- train(Point_diff ~ .,
data = nf,
method = "svmRadial",
tuneGrid=params)
> svm.nf
Support Vector Machines with Radial Basis Function Kernel
1248 samples
14 predictor
No pre-processing
Resampling: Bootstrapped (25 reps)
Summary of sample sizes: 1248, 1248, 1248, 1248, 1248, 1248, ...
Resampling results:
RMSE Rsquared
15.53451 0.0550965
Tuning parameter 'sigma' was held constant at a value of 0.25
Tuning parameter 'C'was held constant at a value of 4
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