This question is quite similar for matrices Roll rows of a matrix independently
But i'm failing to adapt it for 3D tensors
I'm given a tensor
0 0 0
1 1 1
0 0 0
0 0 0
1 1 1
0 0 0
and a vector that specifies by how much I want to shift my matrices column wise
1 2
I want a new tensor where each matrix has been shiften column wise like so
0 0 0
0 0 0
1 1 1
1 1 1
0 0 0
0 0 0
So far I have been able to get a potential mapping indices
import numpy as np
# Input
A = np.array([[0, 0, 0],
[1, 1, 1],
[0, 0, 0],
[0, 0, 0]])
B = np.array([[0, 0, 0],
[1, 1, 1],
[0, 0, 0],
[0, 0, 0]])
AB = np.array([A, B])
# Shifting amount
r = np.array([-1, 1])
d1, d2, d3 = np.ogrid[:AB.shape[0], :AB.shape[1], :AB.shape[2]]
r[r < 0] += AB.shape[1]
r = np.array([r, ]*AB.shape[1]).transpose()
r = r[:, np.newaxis]
# New column indices?
d2 = d2 - r
d2[d2 < 0] += AB.shape[1]
result = AB[d2]
print(result)
But I get this error :
~/Work/ethz/iml/task2 $ python test.py
Traceback (most recent call last):
File "test.py", line 27, in <module>
result = AB[d2]
IndexError: index 2 is out of bounds for axis 0 with size 2
This is what d2 looks like :
[[[1 1 1 1]
[2 2 2 2]
[3 3 3 3]
[0 0 0 0]]
[[3 3 3 3]
[0 0 0 0]
[1 1 1 1]
[2 2 2 2]]]
Approach #1
Adapting strided-based solution from the same linked Q&A for performance -
from skimage.util.shape import view_as_windows
def roll_along_second_axis_3dar(a, r):
r = np.asarray(r)
a_ext = np.concatenate((a,a[:,:-1,:]),axis=1)
n = a.shape[1]
idx = (n-r)%n
w = view_as_windows(a_ext,(1,n,1))[...,0,:,0]
return w[np.arange(len(idx)),idx].swapaxes(1,2)
Sample run -
In [11]: a
Out[11]:
array([[[44, 47, 64],
[67, 67, 9],
[83, 21, 36],
[87, 70, 88]],
[[88, 12, 58],
[65, 39, 87],
[46, 88, 81],
[37, 25, 77]]])
In [12]: roll_along_second_axis_3dar(a, r=[-1,1])
Out[12]:
array([[[67, 67, 9],
[83, 21, 36],
[87, 70, 88],
[44, 47, 64]],
[[37, 25, 77],
[88, 12, 58],
[65, 39, 87],
[46, 88, 81]]])
Approach #2
Going with your try, seems you were close enough. We could get to the final output with few modifications/corrections -
d1, d2, d3 = np.ogrid[:AB.shape[0], :AB.shape[1], :AB.shape[2]]
r[r < 0] += AB.shape[1]
D2 = ((d2 - r).transpose(2,1,0))%AB.shape[1]
out = AB[d1,D2,d3]
Here is an indexing approach with take_along_axis:
idx = (-r[:,None] + np.arange(AB.shape[1])[None]) % AB.shape[1]
res = np.take_along_axis(AB, idx[...,None], 1)
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