I have an NxM matrix in MATLAB that I would like to reorder in similar fashion to the way JPEG reorders its subblock pixels:
(image from Wikipedia)
I would like the algorithm to be generic such that I can pass in a 2D matrix with any dimensions. I am a C++ programmer by trade and am very tempted to write an old school loop to accomplish this, but I suspect there is a better way to do it in MATLAB.
I'd be rather want an algorithm that worked on an NxN matrix and go from there.
1 2 3
4 5 6 --> 1 2 4 7 5 3 6 8 9
7 8 9
Consider the code:
M = randi(100, [3 4]); %# input matrix
ind = reshape(1:numel(M), size(M)); %# indices of elements
ind = fliplr( spdiags( fliplr(ind) ) ); %# get the anti-diagonals
ind(:,1:2:end) = flipud( ind(:,1:2:end) ); %# reverse order of odd columns
ind(ind==0) = []; %# keep non-zero indices
M(ind) %# get elements in zigzag order
An example with a 4x4 matrix:
» M
M =
17 35 26 96
12 59 51 55
50 23 70 14
96 76 90 15
» M(ind)
ans =
17 35 12 50 59 26 96 51 23 96 76 70 55 14 90 15
and an example with a non-square matrix:
M =
69 9 16 100
75 23 83 8
46 92 54 45
ans =
69 9 75 46 23 16 100 83 92 54 8 45
This approach is pretty fast:
X = randn(500,2000); %// example input matrix
[r, c] = size(X);
M = bsxfun(@plus, (1:r).', 0:c-1);
M = M + bsxfun(@times, (1:r).'/(r+c), (-1).^M);
[~, ind] = sort(M(:));
y = X(ind).'; %'// output row vector
The following code compares running time with that of Amro's excellent answer, using timeit. It tests different combinations of matrix size (number of entries) and matrix shape (number of rows to number of columns ratio).
%// Amro's approach
function y = zigzag_Amro(M)
ind = reshape(1:numel(M), size(M));
ind = fliplr( spdiags( fliplr(ind) ) );
ind(:,1:2:end) = flipud( ind(:,1:2:end) );
ind(ind==0) = [];
y = M(ind);
%// Luis' approach
function y = zigzag_Luis(X)
[r, c] = size(X);
M = bsxfun(@plus, (1:r).', 0:c-1);
M = M + bsxfun(@times, (1:r).'/(r+c), (-1).^M);
[~, ind] = sort(M(:));
y = X(ind).';
%// Benchmarking code:
S = [10 30 100 300 1000 3000]; %// reference to generate matrix size
f = [1 1]; %// number of cols is S*f(1); number of rows is S*f(2)
%// f = [0.5 2]; %// plotted with '--'
%// f = [2 0.5]; %// plotted with ':'
t_Amro = NaN(size(S));
t_Luis = NaN(size(S));
for n = 1:numel(S)
X = rand(f(1)*S(n), f(2)*S(n));
f_Amro = @() zigzag_Amro(X);
f_Luis = @() zigzag_Luis(X);
t_Amro(n) = timeit(f_Amro);
t_Luis(n) = timeit(f_Luis);
end
loglog(S.^2*prod(f), t_Amro, '.b-');
hold on
loglog(S.^2*prod(f), t_Luis, '.r-');
xlabel('number of matrix entries')
ylabel('time')
The figure below has been obtained with Matlab R2014b on Windows 7 64 bits. Results in R2010b are very similar. It is seen that the new approach reduces running time by a factor between 2.5 (for small matrices) and 1.4 (for large matrices). Results are seen to be almost insensitive to matrix shape, given a total number of entries.

Here's a non-loop solution zig_zag.m. It looks ugly but it works!:
function [M,index] = zig_zag(M)
[r,c] = size(M);
checker = rem(hankel(1:r,r-1+(1:c)),2);
[rEven,cEven] = find(checker);
[cOdd,rOdd] = find(~checker.'); %'#
rTotal = [rEven; rOdd];
cTotal = [cEven; cOdd];
[junk,sortIndex] = sort(rTotal+cTotal);
rSort = rTotal(sortIndex);
cSort = cTotal(sortIndex);
index = sub2ind([r c],rSort,cSort);
M = M(index);
end
And a test matrix:
>> M = [magic(4) zeros(4,1)];
M =
16 2 3 13 0
5 11 10 8 0
9 7 6 12 0
4 14 15 1 0
>> newM = zig_zag(M) %# Zig-zag sampled elements
newM =
16
2
5
9
11
3
13
10
7
4
14
6
8
0
0
12
15
1
0
0
Here's a way how to do this. Basically, your array is a hankel matrix plus vectors of 1:m, where m is the number of elements in each diagonal. Maybe someone else has a neat idea on how to create the diagonal arrays that have to be added to the flipped hankel array without a loop.
I think this should be generalizeable to a non-square array.
% for a 3x3 array
n=3;
numElementsPerDiagonal = [1:n,n-1:-1:1];
hadaRC = cumsum([0,numElementsPerDiagonal(1:end-1)]);
array2add = fliplr(hankel(hadaRC(1:n),hadaRC(end-n+1:n)));
% loop through the hankel array and add numbers counting either up or down
% if they are even or odd
for d = 1:(2*n-1)
if floor(d/2)==d/2
% even, count down
array2add = array2add + diag(1:numElementsPerDiagonal(d),d-n);
else
% odd, count up
array2add = array2add + diag(numElementsPerDiagonal(d):-1:1,d-n);
end
end
% now flip to get the result
indexMatrix = fliplr(array2add)
result =
1 2 6
3 5 7
4 8 9
Afterward, you just call reshape(image(indexMatrix),[],1) to get the vector of reordered elements.
EDIT
Ok, from your comment it looks like you need to use sort like Marc suggested.
indexMatrixT = indexMatrix'; % ' SO formatting
[dummy,sortedIdx] = sort(indexMatrixT(:));
sortedIdx =
1 2 4 7 5 3 6 8 9
Note that you'd need to transpose your input matrix first before you index, because Matlab counts first down, then right.
Assuming X to be the input 2D matrix and that is square or landscape-shaped, this seems to be pretty efficient -
[m,n] = size(X);
nlim = m*n;
n = n+mod(n-m,2);
mask = bsxfun(@le,[1:m]',[n:-1:1]);
start_vec = m:m-1:m*(m-1)+1;
a = bsxfun(@plus,start_vec',[0:n-1]*m);
offset_startcol = 2- mod(m+1,2);
[~,idx] = min(mask,[],1);
idx = idx - 1;
idx(idx==0) = m;
end_ind = a([0:n-1]*m + idx);
offsets = a(1,offset_startcol:2:end) + end_ind(offset_startcol:2:end);
a(:,offset_startcol:2:end) = bsxfun(@minus,offsets,a(:,offset_startcol:2:end));
out = a(mask);
out2 = m*n+1 - out(end:-1:1+m*(n-m+1));
result = X([out2 ; out(out<=nlim)]);
Quick runtime tests against Luis's approach -
Datasize: 500 x 2000
------------------------------------- With Proposed Approach
Elapsed time is 0.037145 seconds.
------------------------------------- With Luis Approach
Elapsed time is 0.045900 seconds.
Datasize: 5000 x 20000
------------------------------------- With Proposed Approach
Elapsed time is 3.947325 seconds.
------------------------------------- With Luis Approach
Elapsed time is 6.370463 seconds.
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