We have a windows application which is written by electron and SQLite as database, the problem is we want our application to secure the database file after its first authentication with database, and only have the application itself can modify the file, while preventing the windows standard user from modifying or deleting the file manually. What are the options here?
You can use third-party applications like https://robotronic.de/runasspcen.html
Run application as another user or start program as administrator from a limited account like the command runas, but without to enter login information on each start.

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