I would like to calculate a quadratic form: x' Q y
in Julia.
What would be the most efficient way to calculate this for the cases:
Q
is symmetric.x
and y
are the same (x = y
).Q
is symmetric and x = y
.I know Julia has dot()
. But I wonder if it is faster than BLAS call.
The existing answers are both good. However, a few additional points:
While Julia will indeed by default simply call BLAS here, as Oscar notes, some BLASes are faster than others. In particular, MKL will often be somewhat faster than OpenBLAS on modern x86 hardware. Fortunately, in Julia it is unusually easy to manually choose your BLAS backend. Simply typing using MKL
at the REPL on Julia 1.7 or later will switch you to the MKL backend via the MKL.jl package.
While it is not used by default, there do now exist a couple pure Julia linear algebra packages that can match or even beat traditional Fortran-based BLAS. In particular, Octavian.jl:
Julia's LinearAlgebra stdlib has native implementations of 3-argument dot
, and also a version that is specialized for symmetric/hermitian matrices. You can view the source here and here.
You can confirm that they do not allocate using BenchmarkTools.@btime
or BenchmarkTools.@ballocated
(remember to interpolate variables using $
). The symmetry of the matrix is exploited, but looking at the source, I don't see how x == y
could enable any serious speedup, except perhaps saving a few array lookups.
Edit: To compare the execution speed of the BLAS version and the native one, you can do
1.7.0> using BenchmarkTools, LinearAlgebra
1.7.0> X = rand(100,100); y=rand(100);
1.7.0> @btime $y' * $X * $y
42.800 μs (1 allocation: 896 bytes)
1213.5489200642382
1.7.0> @btime dot($y, $X, $y)
1.540 μs (0 allocations: 0 bytes)
1213.548920064238
This is a big win for the native version. For bigger matrices, the picture changes, though:
1.7.0> X = rand(10000,10000); y=rand(10000);
1.7.0> @btime $y' * $X * $y
33.790 ms (2 allocations: 78.17 KiB)
1.2507105095988091e7
1.7.0> @btime dot($y, $X, $y)
44.849 ms (0 allocations: 0 bytes)
1.2507105095988117e7
Possibly because BLAS uses threads, while dot
is not multithreaded. There are also some floating point differences.
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