The title summarizes the goal that is more exactly to dynamically retrieve the number of dimensions of MATLAB arrays passed to armadillo matrices.
I would like to change the second and third arguments of mY() and mD() to parametric ones below.
// mat(ptr_aux_mem, n_rows, n_cols, copy_aux_mem = true, strict = false)
arma::mat mY(&dY[0], 2, 168, false);
arma::mat mD(&dD[0], 2, 168, false);
This must be definitely a common use case, but I still could not find a nice way of achieving it for the general case when the number of dimensions of the arrays feeding from MATLAB could be arbitrary (n > 2).
For the matrix (two dimensional) case, I could possibly hack my way around but I feel like that is not elegant enough (probably not efficient either).
IMHO, the way to go must be:
matlab::data::TypedArray<double> has getDimensions() member function which retrieves matlab::data::ArrayDimensions that is fundamentally a std::vector<size_t>.
Indexing the first and second element of the vector retrieved by getDimensions() one can retrieve the number of rows and columns, for instance like below.
unsigned int mYrows = matrixY.getDimensions()[0];
unsigned int mYcols = matrixY.getDimensions()[1];
However, with my current setup, I cannot get to call getDimensions() through pointers/references in the foo() function of sub.cpp. If it is feasible, I would neither like to create additional temporary objects nor passing other arguments to foo(). How it possible that way?
Intuition keeps telling me that there must be an elegant solution that way too. Maybe using multiple indirection?
I would highly appreciate any help, hints or constructive comments from more knowledgeable SO members. Thank you in advance.
Setup:
Two C++ source files and a header file:
main.cpp
sub.cpp
sub.hpp
// main.cpp
// MATLAB API Header Files
#include "mex.hpp"
#include "mexAdapter.hpp"
// Custom header
#include "sub.hpp"
// Overloading the function call operator, thus class acts as a functor
class MexFunction : public matlab::mex::Function {
public:
void operator()(matlab::mex::ArgumentList outputs,
matlab::mex::ArgumentList inputs){
matlab::data::ArrayFactory factory;
// Validate arguments
checkArguments(outputs, inputs);
matlab::data::TypedArray<double> matrixY = std::move(inputs[0]);
matlab::data::TypedArray<double> matrixD = std::move(inputs[1]);
const double csT = inputs[2][0];
const double csKy = inputs[3][0];
buffer_ptr_t<double> mY = matrixY.release();
buffer_ptr_t<double> mD = matrixD.release();
double* darrY = mY.get();
double* darrD = mD.get();
// data type of outp is "just" a plain double, NOT a double array
double outp = foo(darrY, darrD, csT, csKy);
outputs[0] = factory.createScalar(outp);
void checkArguments(matlab::mex::ArgumentList outputs, matlab::mex::ArgumentList inputs){
// Create pointer to MATLAB engine
std::shared_ptr<matlab::engine::MATLABEngine> matlabPtr = getEngine();
// Create array factory, allows us to create MATLAB arrays in C++
matlab::data::ArrayFactory factory;
// Check input size and types
if (inputs[0].getType() != ArrayType::DOUBLE ||
inputs[0].getType() == ArrayType::COMPLEX_DOUBLE)
{
// Throw error directly into MATLAB if type does not match
matlabPtr->feval(u"error", 0,
std::vector<Array>({ factory.createScalar("Input must be double array.") }));
}
// Check output size
if (outputs.size() > 1) {
matlabPtr->feval(u"error", 0,
std::vector<Array>({ factory.createScalar("Only one output is returned.") }));
}
}
};
// sub.cpp
#include "sub.hpp"
#include "armadillo"
double foo(double* dY, double* dD, const double T, const double Ky) {
double sum = 0;
// Conversion of input parameters to Armadillo types
// mat(ptr_aux_mem, n_rows, n_cols, copy_aux_mem = true, strict = false)
arma::mat mY(&dY[0], 2, 168, false);
arma::mat mD(&dD[0], 2, 168, false);
// Armadillo calculations
for(int t=0; t<int(T); t++){
// some armadillo based calculation
// each for cycle increments sum by its return value
}
return sum;
}
// sub.hpp
#ifndef SUB_H_INCLUDED
#define SUB_H_INCLUDED
double foo(double* dY, double* dD, const double T, const double Ky);
#endif // SUB_H_INCLUDED
One way is to convert it to arma matrix using a function
template<class T>
arma::Mat<T> getMat( matlab::data::TypedArray<T> A)
{
matlab::data::TypedIterator<T> it = A.begin();
matlab::data::ArrayDimensions nDim = A.getDimensions();
return arma::Mat<T>(it.operator->(), nDim[0], nDim[1]);
}
and call it by
arma::mat Y = getMat<double>(inputs[0]);
arma::mat D = getMat<double>(inputs[1]);
...
double outp = foo(Y,D, csT, csKy);
and change foo() to
double foo( arma::mat& dY, arma::mat& dD, const double T, const double Ky)
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